BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B05SP1|AL426318
(780 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig198 1140 0.0
3x_Contig1334 133 7e-31
>3x_Contig198
Length = 1143
Score = 1140 bits (568), Expect = 0.0
Identities = 592/610 (97%)
Strand = Plus / Minus
Query: 1 gtttccacatcattttaaagcgatatttcatttcaagctggggggctgattgctattgtt 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 gtttccacatcattttaaagcgatatttcatttcaagctggggctctgattgctattgtt 562
Query: 61 tccggtattgttctgtcgataataacgggaaatgattcacgagtttaaaaaaaaatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccggtattgttctgtcgataataacgggaaatgattcacgagtttaaaaaaaaatttct 502
Query: 121 cgttgccagccgtgaagataaaaaaaaaaaaaaaaaaaaaattdaaaamacatactcatt 180
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 501 cgttgccagccgtgaagataaaaaaaaaaaaaaaaaaaaaattgaaaacacatactcatt 442
Query: 181 atctgtgcgaattaaatacagtttttaaaggcgtaactaaratacatatccattaaaktt 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 441 atctgtgcgaattaaatacagtttttaaaggcgtaactaagatacatatccattaaagtt 382
Query: 241 tccacctcaraataccamaggtacgtggtacaaataaactkttattatcgaaaagcacca 300
||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 tccacctcagaataccacaggtacgtggtacaaataaactgttattatcgaaaagcacca 322
Query: 301 acctttctaaagctagaacctggaataaraagcagatcgaaaraktgctgtttttttcat 360
|||||||||||||||||||||||||||| ||||||||||||| | |||||||||| ||||
Sbjct: 321 acctttctaaagctagaacctggaataagaagcagatcgaaagagtgctgtttttgtcat 262
Query: 361 tctttgagcgatattggcggttgagaatttttttttggttcttgcaaaccgctcaaaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctttgagcgatattggcggttgagaatttttttttggttcttgcaaaccgctcaaaatt 202
Query: 421 aggctttacagaattcctaataacattacaggaacctgtgaataatctcattactagtaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggctttacagaattcctaataacattacaggaacctgtgaataatctcattactagtaa 142
Query: 481 aattccaacctctgaaccgtatcaggctatttttggaatttctaaggtcgttcatatctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 aattccaacctctgaaccgtatcaggctatttttggaatttctaaggtcgttcatatctg 82
Query: 541 actttttkttctctcgcttttcccttaaararacataaraactggttatagaataagcta 600
||||||| ||||||||||||||||||||| | |||||| |||||||||||||||||||||
Sbjct: 81 actttttgttctctcgcttttcccttaaagagacataagaactggttatagaataagcta 22
Query: 601 tatttwatct 610
||||| ||||
Sbjct: 21 tatttaatct 12
>3x_Contig1334
Length = 7302
Score = 133 bits (66), Expect = 7e-31
Identities = 73/74 (98%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 707 cccggtcctgacggctccttacaatcaacttccctcgttgtgccacatttggctggtatc 766
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 7302 cccggtcctgacggctccttacaatcaacttccctcg-tgtgccacatttggctggtatc 7244
Query: 767 gaggatcctttacc 780
||||||||||||||
Sbjct: 7243 gaggatcctttacc 7230
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,711
Number of Sequences: 1807
Number of extensions: 22711
Number of successful extensions: 6508
Number of sequences better than 1.0e-20: 2
length of query: 780
length of database: 10,358,551
effective HSP length: 16
effective length of query: 764
effective length of database: 10,329,639
effective search space: 7891844196
effective search space used: 7891844196
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)